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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807173.1_cds_XP_016494721.1_9105
CDS Infomation

[gene=LOC107813915] [db_xref=GeneID:107813915] [protein=protein SHOOT GRAVITROPISM 5-like] [protein_id=XP_016494721.1] [location=join(20250..20349,20492..20891,21776..22565)] [gbkey=CDS]
Sequence

ATGTTAAGCAACAATCCATCTTCTTCATCCGACCCGTTTACTTGCTCAGAAAATGGAAAC
AATGCTAATAGAAGAAAAAGAAGACCCGCAGGAACCCCAGATCCGGATGCAGAAGTGGTA
TCGCTCTCACCAAAAACATTACTAGAATCAGATCGATACGTATGTGAGATCTGTAACCAA
GGATTTCAAAGGGACCAAAACTTACAGATGCACAGAAGAAGGCATAAGGTGCCATGGAAA
TTGCTCAAAAGAGAAACCCCAATTGTTAGAAAGCGCGTTTTCGTATGCCCAGAACCCACT
TGTCTACACCATGATCCTTGTCATGCTTTAGGAGATCTCGTCGGTATTAAAAAGCATTTC
CGTAGAAAACACAGCAATCACAAGCAGTGGGTCTGTGAAAAATGCTCGAAAGGATATGCT
GTTCAGTCTGATTACAAAGCTCATCTTAAAACTTGTGGTACTCGTGGTCATTCCTGTGAT
TGTGGTCGCGTTTTCTCAAGGGTGGAAAGCTTCATTGAACACCAAGATGCTTGTAGCATG
GGAAGACTCCGATCAGAATCACAATCTTTACATCCATCTAATTGTCTTTCTCGTACAGCT
TCAAGTCCTAGCCCCTCAAGTGACACAAATCTCAGCACAACACCTTGGGCTACTACTTTG
CTCCAAAATCTGTCGTCATCCACAGCTACGCATCATGTTAATCCAAACATAATCAAGAAT
TCCACAAAGCAACGACACAATTTAGAGCTTCAGCTCTTGACTACCACTACATCATCATCT
AGCCCGTTTGATGTCTCGGTATCGTCCAAACCAAACGAAGATCACTCAACTTATAATCTC
CAACTCTCCATTGGTTCCTCAGATTTCAACGAGAGAAACGAGTCGTCAGAAAATGCTACG
GCATTGGATGCTTTAAAGCTTAAAGATGAAGCGAGGGAGCAGTTAAAACTAGCGATGGCA
GAAAAAGCATATGCTGAAGAAGCAAGGCAACAAACGAAGAGGCAAATTGAGTTAGCCGAG
CAGGAATTTGCTAATGCTAAGAGAATTCGGCAACAAGCACAAGTGGAGTTAGATAAGGCT
AATGCTTTGAAAAAACAAGCTATCAAGCAAATAAACTCTACTCTTTCGCAAATAACTTGC
CATTCTTGCAAACAGAAGTTTCAAGCTCCTCCTTCAGATGAGAATAATTCGTTAACGTTG
AGTTATATTTCTTCGGCTTTAACAGAAGGACATCATGAAGTTGGCAAGAATATCAACGAA
ACCAATCATCTCAAACTTTCTCAACGTTAG

Peptide Sequence

PEP ID

XP_016494721.1
PEP Infomation

PREDICTED: protein SHOOT GRAVITROPISM 5-like [Nicotiana tabacum]
Sequence

MLSNNPSSSSDPFTCSENGNNANRRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ
GFQRDQNLQMHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHF
RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSM
GRLRSESQSLHPSNCLSRTASSPSPSSDTNLSTTPWATTLLQNLSSSTATHHVNPNIIKN
STKQRHNLELQLLTTTTSSSSPFDVSVSSKPNEDHSTYNLQLSIGSSDFNERNESSENAT
ALDALKLKDEAREQLKLAMAEKAYAEEARQQTKRQIELAEQEFANAKRIRQQAQVELDKA
NALKKQAIKQINSTLSQITCHSCKQKFQAPPSDENNSLTLSYISSALTEGHHEVGKNINE
TNHLKLSQR

Transcript Sequence

Gene sequence data has not been registered.